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一种用于预测卵巢癌预后、免疫特征及药物敏感性的细胞焦亡相关长链非编码 RNA 签名
Authors Liu PW, Liu ZY, Deng SJ, Zhang X, Wang ZB, Wu NY , Liu CS, Hu MH, Wang J, Li H
Received 10 October 2024
Accepted for publication 16 April 2025
Published 23 April 2025 Volume 2025:18 Pages 585—601
DOI http://doi.org/10.2147/OTT.S491130
Checked for plagiarism Yes
Review by Single anonymous peer review
Peer reviewer comments 2
Editor who approved publication: Dr Nagashree Seetharamu
Po-Wu Liu,1,2,* Zhao-Yi Liu,2,* Shi-Jia Deng,2,* Xiu Zhang,2 Zhi-Bin Wang,2 Na-Yiyuan Wu,2 Chao-Shui Liu,3 Ming-Hua Hu,3 Jing Wang,2 He Li2,3
1University of South China, Hengyang Medical School, Graduate Collaborative Training Base of Hunan Cancer Hospital, Hengyang, Hunan, 421001, People’s Republic of China; 2Hunan Clinical Research Center in Gynecologic Cancer, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, Hunan, 410013, People’s Republic of China; 3Hunan Provincial Key Laboratory of the Research and Development of Novel Pharmaceutical Preparations, Changsha Medical University, Changsha, Hunan, 410219, People’s Republic of China
*These authors contributed equally to this work
Correspondence: Jing Wang, Email wangjing0081@hnca.org.cn He Li, Email lihe@hnca.org.cn
Background: Multiple studies have suggested that lncRNAs and pyroptosis play important roles in ovarian cancer (OC). However, the function of pyroptosis-related lncRNAs (PRLs) in OC is not fully understood.
Methods: Clinical information and RNA-seq data of OC patients (n = 379) were collected from TCGA database. Pearson correlation analysis and univariate Cox analysis were performed to identify prognostic PRLs, respectively. LASSO-COX regression was utilized to construct a prognostic PRLs signature. Kaplan–Meier (K–M) curve analyses and receiver operating characteristics (ROC) were used to evaluate the prognostic prediction of the signature. The association between risk score and tumor microenvironment infiltration, immunotherapy response and chemotherapy sensitivity were also analyzed. In addition, the function of TYMSOS on OC and pyroptosis was experimentally confirmed in cell lines.
Results: Firstly, 32 prognostic PRLs were identified, and a novel prognostic PRLs signature was constructed and validated. Surprisingly, the prognostic PRLs signature could solidly predict the clinical outcome of patients with OC and patients with high-risk score shown a short overall survival. GSEA results suggested that the RPLs were mainly enriched in the inflammatory response pathway, p53 pathway, TGF-β signaling and TNFα signaling. Besides, our results demonstrated that the risk score was significantly associated with patients with immune infiltration, immunotherapy response and the sensitivity of veliparib and metformin. Furthermore, the oncogene effect of TYMSOS on OC by inhibiting pyroptosis was verified by experiments.
Conclusion: This study found that the prognostic PRLs signature may serve as an efficient biomarker in predicting the prognosis, tumor microenvironment infiltration, and sensitivity of chemotherapeutic agents. TYMSOS is a potential biomarker in OC, and it might promote tumor progression by inhibiting pyroptosis.
Keywords: pyroptosis, ovarian cancer, prognosis, immune microenvironment, signature